TrackCell Documentation

Welcome to TrackCell’s documentation!

TrackCell is a Python package for processing and visualizing single-cell and spatial transcriptomics data, particularly designed for 10X Genomics HD spatial transcriptomics data.

Contents:

• Installation
  • PyPI Installation
  • Upgrade to Latest Version
  • Dependencies
  • Development Installation
• Usage Guide
  • Reading SpaceRanger Output
  • Visualization
  • Computing Distances to a Label
• API
  • Input/Output Functions
  • Plotting Functions
  • Tools Functions
• Examples
  • Visium HD Human Colorectal Cancer
  • label distance
  • 保存和读取带有 geometries 的 h5ad 文件
• Changelog
  • Version 0.2.8
  • Version 0.2.5
  • Version 0.2.4
  • Version 0.2.3
  • Version 0.2.2
  • Version 0.2.1
  • Version 0.2.0

Indices and tables

• Index

• Module Index

• Search Page